(Download Checklist)

BioSample Checklist

 

 

BioSample

 

 

SAMN___________

Submitter

Name, email

Institution

 

 

General information

Release date

single sample / multiple samples

 

 

Sample type

Pathogen affecting public health

Microbe

Model organism or animal sample

Metagenome or environmental sample

Invertebrate

Human sample

Plant sample

Virus sample

Genome, metagenome or marker sequences

Beta-lactamase

 

 

Attributes

Sample Name

Organism

isolate and/or breed

host and/or isolation source

collection date

geographic location

tissue

 

 

BioProject

 

 

Title and Comments

Sample Title

Public description

 

 

Check and Submit

 

 

 

 

BioProject Checklist

 

 

 

BioProject

 

 

PRJNA___________

Submitter

Name, email

Institution

 

 

Project type

Project data type

Sample scope

 

 

Target

Organism name

Strain, Breed, Cultivar, Isolate name, Label, Description

 

 

General Info

Release date

Project title

part of a larger initiative

External Links

Select your grants

 

 

BioSample

 

 

Publications

 

 

Check and Submit

 

 

 

 

SRA Checklist

 

 

 

SRA

 

 

SRR___________

Submitter

Name, email

Institution

 

 

General Information

BioProject: PRJNAxxxxxx

BioSample: SAMNxxxxxx

Release date

 

 

Meta Data

Excel file: BioProject ID, BioSample ID, library ID, title, library strategy, library source, library selection, library layout, platform, instrument model, design description, file type, filename, filename2, filename3, filename4

 

Files

File upload: Aspera browser plugin, Aspera command line, FTP upload (xxx.fastq)

 

 

Check and Submit

 

 

 

 

TSA checklist

 

 

 

TSA

 

 

GAA___________

Submitter

Name, email

Institution

 

 

General Information

BioProject: PRJNAxxxxx

BioSample: SAMNxxxxx

Release Date

Primary Data (SRRxxxxxx)

Assembly MetaData

Update

 

 

File

fasta (xxx.fas) or ASN.1 format (xxx.sqn)

 

 

Sequence

upload: Aspera browser plugin, Aspera command line, FTP upload

 

 

Check and Submit